BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002A05SP1|AL424884
(1064 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig197 623 e-178
>3x_Contig197
Length = 1712
Score = 623 bits (311), Expect = e-178
Identities = 343/361 (95%)
Strand = Plus / Plus
Query: 1 ctaagacctcactgatgatgaactggaagatcacccgttcagggaaaatgtcaattccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1317 ctaagacctcactgatgatgaactggaagatcacccgttcagggaaaatgtcaattccca 1376
Query: 61 atttttggnaatatgagttaacattcttaatatccattcttaggaaatctagagacatag 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 atttttggaaatatgagttaacattcttaatatccattcttaggaaatctagagacatag 1436
Query: 121 gatgttctggttgtwcggattgcgaaacatcaataatatwhvgcttatcctcatgtacaa 180
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1437 gatgttctggttgtacggattgcgaaacatcaataatataaagcttatcctcatgtacaa 1496
Query: 181 tactattatwctcactcaagtctgchtgawctaagcgacatacctgatatwacagtctca 240
||||||||| ||||||||||||||| ||| |||||||||||||||||||| |||||||||
Sbjct: 1497 tactattatactcactcaagtctgcatgaactaagcgacatacctgatataacagtctca 1556
Query: 241 tgtacgctatcattaanttgtagttatgtttaatttcttctctatctttgtbaggntgat 300
|||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| ||||
Sbjct: 1557 tgtacgctatcattaaattgtagtaatgtttaatttcttctctatctttgtaaggatgat 1616
Query: 301 ctttaagcctcggagatgcgaaaccatctcctctatttanbnnttccatgactaabacgt 360
||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 1617 ctttaagcctcggagatgcgaaaccatctcctctatttaaaaattccatgactaaaacgt 1676
Query: 361 t 361
|
Sbjct: 1677 t 1677
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6969
Number of Sequences: 1807
Number of extensions: 6969
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 1064
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1048
effective length of database: 10,329,639
effective search space: 10825461672
effective search space used: 10825461672
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)